The stratigraphy of Late Quaternary geologic units beneath Long Island Sound (LIS) is interpreted from 3,500 km of high-resolution, seismic-reflection profiles supplemented by vibracore data. Knowledge gained from onshore regional geologic studies and previous offshore investigations is also incorporated in these interpretations.

Glacial deposits overlie and nearly fill an Inner Lowland which is floored by crystalline rocks in the north and bounded to the south by an irregular, north-facing cuesta scarp in Cretaceous Coastal-Plain strata. The thick glacial section consists largely of sediment that was deposited in glacial Lake Connecticut during the retreat of the last (late Wisconsin) ice sheet.

Ice-marginal lacustrine fan deposits and submerged extensions of the southeastern Connecticut recessional moraines mark positions of the ice margin during systematic northward retreat. When the ice margin stood at positions just north of the present shoreline of Connecticut (17.6-16.5 ka), glacial Lake Connecticut was slightly larger than Long Island Sound is today. Ice-marginal deltas and near-ice marginal fluviodeltaic deposits occur along coastal Connecticut. Delta-building was diachronous; progressively younger deltas record northwesterly retreat of the ice margin and lowering lake levels. Distally from the deltas, varied lake-clays (up to 150 m thick) drape the underlying topography.

The lake spillway cut across the Harbor Hill-Roanoke Point-Fishers Island-Charlestown end moraine at its lowest point just west of Fishers Island (The Race). Lake levels fell as the spillway notch was erosionally deepened, and gradually the lakebed became subaerially exposed. A largely preserved channel system cuts the lake-deposit surface; fluvial channel-fill sediments are overlain by estuarine sediments in the channel system. Perhaps as early as 15 ka, but no later than 13 ka, the sea entered the Basin through the channel at The Race and quickly transgressed westward via the lakebed channel system. As the sea rose further and spread throughout the Basin, a wave-cut surface was formed. Extensive marine deltaic deposits, up to 40 m thick, overlie the wave-cut marine unconformity in the east-central part of the Basin. These sediments were derived from erosion of the drained bed of Lake Hitchcock, in the Connecticut valley to the north, and were deposited in a -40-m relative sea at about 12.4 ka.

Where quiet waters prevail, marine mud generally less than 15 m thick blankets the older deposits of the Basin. Elsewhere, especially in eastern LIS, tidal currents are actively reworking and transporting glacial and postglacial deposits.