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Simulation of hydrodynamics and water temperature in a 21-mile reach of the upper Illinois River, Illinois, 2020–22
Michael R. Ament, David C. Heimann
2024, Scientific Investigations Report 2024-5025
This report describes the development of a CE-QUAL-W2 river hydrodynamics and temperature model of a 21-mile reach of the Illinois River including a 3-mile reach of a major tributary, the Fox River. Model outputs consist of streamflow, water velocity, water-surface elevation, and water-temperature time series that can be used to...
Evaluating an improved systems approach to wetland crediting: Consideration of wetland ecosystem services
Pamela Mason, Gregory B. Noe, Alicia Berlin, Denise Clearwater, Sally Claggett, Dave Goerman, Brooke J. Landry, Alison Santoro
2024, Report
The Chesapeake Bay Agreement (CBA) has numerous direct goals for improving habitat, living resources, and water quality, conserving lands, engaging communities and addressing a changing climate. To date, the progress toward the wetlands outcome (creation/ restoration of 85,000 acres and enhancement of 150,000 acres) has been very slow and the...
A multi-marker assessment of sewage contamination in streams using human-associated indicator bacteria, human-specific viruses, and pharmaceuticals
Peter L. Lenaker, Matthew A. Pronschinske, Steven R. Corsi, Joel P. Stokdyk, Hayley Olds, Deborah K. Dila, Sandra L. McLellan
2024, Science of the Total Environment (930)
Human sewage contaminates waterways, delivering excess nutrients, pathogens, chemicals, and other toxic contaminants. Contaminants and various sewage indicators are measured to monitor and assess water quality, but these analytes vary in their representation of sewage contamination and the inferences about water quality they support....
Evaluation of debris-flow building damage forecasts
Katherine R. Barnhart, Christopher R. Miller, Francis K. Rengers, Jason W. Kean
2024, Natural Hazards and Earth System Sciences (24) 1459-1483
Reliable forecasts of building damage due to debris flows may provide situational awareness and guide land and emergency management decisions. Application of debris-flow runout models to generate such forecasts requires combining hazard intensity predictions with fragility functions that link hazard intensity with building damage....
Special Contributing Area Loading Program user’s manual
Henry F. Doyle, Marian M. Domanski
2024, Open-File Report 2024-1021
The Special Contributing Area Loading Program (SCALP) is a hydrologic routing program that simulates reservoir routing through a linear-reservoir-in-series method. The Java version of SCALP was developed to replicate and replace the functionality of an older version of the program written in Fortran. SCALP models flow through three reservoirs in...
Evaluation of metrics and thresholds for use in national-scale river harmful algal bloom assessments
Sarah M. Stackpoole, Jacob Aaron Zwart, Jennifer L. Graham, Judson Harvey, Noah Schmadel, Jennifer C. Murphy
2024, Ecological Indicators (162)
The spatiotemporal distribution of harmful algal blooms (HABs) in rivers remains poorly understood, and there is an urgent need to develop a consistent set of metrics to better document HAB occurrences and forecast future events. Using data from seven sites in...
Status of water quality in groundwater resources used for drinking-water supply in the southeastern San Joaquin Valley, 2013–15—California GAMA Priority Basin Project
Karen R. Burow, Jennifer L. Shelton, Miranda S. Fram
2024, Scientific Investigations Report 2024-5009
The California Groundwater Ambient Monitoring and Assessment Program Priority Basin Project (GAMA-PBP) investigated water quality of groundwater resources used for drinking-water supplies in the Madera-Chowchilla, Kings, Kaweah, Tule, and Tulare Lake groundwater subbasins of the southeastern San Joaquin Valley during 2013–15. The study focused primarily on groundwater resources used for...
Atmospheric river activity during the late Holocene exceeds modern range of variability in California
Clarke Alexandra Knight, Lysanna Anderson, Liubov S. Presnetsova, Marie Rhondelle Champagne, David Wahl
2024, Nature Communications Earth and Environment (5)
Atmospheric rivers are associated with some of the largest flood-producing precipitation events in western North America, particularly California. Insight into past extreme precipitation can be reconstructed from sedimentary archives on millennial timescales. Here we document atmospheric river activity near Leonard Lake, California, over 3,200 years, using...
Ecological inferences on invasive carp survival using hydrodynamics and egg drift models
Ruichen Xu, Duane Chapman, Caroline M. Elliott, Bruce Call, Robert B. Jacobson, Binbin Yang
2024, Scientific Reports (14)
Bighead carp (Hypophthalmichthys nobilis), silver carp (H. molitrix), black carp (Mylopharyngodon piceus), and grass carp (Ctenopharyngodon idella), are invasive species in North America. However, they hold significant economic importance as food sources in China. The drifting stage of carp eggs has received great attention because egg...
Bathymetric and velocimetric surveys at highway bridges crossing the Missouri and Mississippi Rivers on the periphery of Missouri, June 13–22, 2022
Richard J. Huizinga
2024, Scientific Investigations Report 2024-5032
Bathymetric and velocimetric data were collected by the U.S. Geological Survey, in cooperation with the Missouri Department of Transportation, near seven bridges at six highway crossings of the Missouri and Mississippi Rivers on the periphery of Missouri from June 13–22, 2022. A multibeam echosounder mapping system was used to obtain...
Spatiotemporal patterns in habitat use of natal and non-natal adult Atlantic sturgeon in two spawning rivers
Shannon L. White, Matthew W. Breece, Dewayne A. Fox, David C. Kazyak, Amanda Higgs, Ian A Park, Cassia Busch, Barbara A. Lubinski, Robin L. Johnson, Amy Welsh
2024, Conservation Genetics (12)
BackgroundMonitoring movement across an organism’s ontogeny is often challenging, particularly for long-lived or wide-ranging species. When empirical data are unavailable, general knowledge about species’ ecology may be used to make assumptions about habitat use across space or time. However, inferences...
Craters of habit: Patterns of deformation in the western Galápagos
Eoin Reddin, Susanna K. Ebmeier, Marco Bagnardi, Andrew F. Bell, Pedro Espín Bedón
2024, Volcanica
The western Galápagos islands of Fernandina and Isabela comprise six active volcanoes that have deformed since first observed by satellite radar in the early 1990s. We analyse new (2015–2022) displacement time series at Alcedo, Cerro Azul, Darwin, Fernandina, Sierra Negra, and Wolf volcanoes in the context of...
Calculation of a suspended-sediment concentration-turbidity regression model and flood-ebb suspended-sediment concentration differentials from marshes near Stone Harbor and Thompsons Beach, New Jersey, 2018–19 and 2022–23
Olivia A. De Meo, Robert D. Bales, Neil K. Ganju, Eric D. Marsjanik, Steven E. Suttles
2024, Data Report 1193
The U.S. Geological Survey collected water velocity and water quality data from salt marshes in Great Channel, southwest of Stone Harbor, New Jersey, and near Thompsons Beach, New Jersey, to evaluate restoration effectiveness after Hurricane Sandy and monitor postrestoration marsh health. Time series data of turbidity and water velocity were...
ECCOE Landsat quarterly Calibration and Validation report—Quarter 4, 2023
Md Obaidul Haque, Rajagopalan Rengarajan, Mark Lubke, Md Nahid Hasan, Ashish Shrestha, Jerad L. Shaw, Alex Denevan, Kathryn Ruslander, Esad Micijevic, Michael J. Choate, Cody Anderson, Kurt Thome, Julia Barsi, Ed Kaita, Raviv Levy, Jeff Miller, Leibo Ding
2024, Open-File Report 2024-1026
Executive SummaryThe U.S. Geological Survey Earth Resources Observation and Science Calibration and Validation (Cal/Val) Center of Excellence (ECCOE) focuses on improving the accuracy, precision, calibration, and product quality of remote-sensing data, leveraging years of multiscale optical system geometric and radiometric calibration and characterization experience. The ECCOE Landsat Cal/Val Team continually...
First documentation of grass carp spawning in Lake Erie’s Central Basin
Corbin David Hilling, Adam J. Landry, James Roberts, Nathan Thompson, Catherine A. Richter, Ryan E. Brown, Christine M. Mayer, Song S. Qian
2024, Journal of Great Lakes Research
Grass carp (Ctenopharyngodon idella) are non-indigenous to North America having been translocated to the United States in the 1960s as a potential non-chemical solution for nuisance aquatic vegetation. Reproductively viable grass carp now exist in many watersheds in the United States. In the Great Lakes basin, grass carp were first...
West Nile virus (avian) case definition for wildlife
Stéphane Lair, Valerie I. Shearn-Bochsler, Marnie Zimmer
2024, Techniques and Methods 19-C1
Diagnostic laboratories receive carcasses and samples for diagnostic evaluation and pathogen/toxin detection. Case definitions bring clarity and consistency to the evaluation process. Their use within and between organizations allows more uniform reporting of diseases and etiologic agents. The intent of a case definition is to provide scientifically based criteria for...
Leveraging natural capital accounting to support businesses with nature-related risk assessments and disclosures
Jane Carter Ingram, Emily McKenzie, Kenneth J. Bagstad, John Finisdore, Rayne van den Berg, Eli P. Fenichel, Michael Vardon, Stephen M. Posner, Marta Santamaria, Lisa Mandle, Richard J. Barker, James Spurgeon
2024, Philosophical Transactions of the Royal Society B: Biological Sciences (379)
Nature loss threatens businesses, the global economy and financial stability. Understanding and addressing these risks for business will require credible measurement approaches and data. This paper explores how natural capital accounting (NCA) can support business data and information needs related to nature, including disclosures aligned with the Taskforce on Nature-related...
Groundwater sustainability and land subsidence in California’s Central Valley
Claudia C. Faunt, Jonathan A. Traum, Scott E. Boyce, Whitney A. Seymour, Elizabeth Rae Jachens, Justin T. Brandt, Michelle Sneed, Sandra Bond, Marina Marcelli
2024, Water (16)
The Central Valley of California is one of the most prolific agricultural regions in the world. Agriculture is reliant on the conjunctive use of surface-water and groundwater. The lack of available surface-water and land-use changes have led to pumping-induced groundwater-level and storage declines, land subsidence, changes to streamflow and...
Evaluation of streamflow predictions from LSTM models in water- and energy-limited regions in the United States
Kul Bikram Khand, Gabriel B. Senay
2024, Machine Learning with Applications (16)
The application of Long Short-Term Memory (LSTM) models for streamflow predictions has been an area of rapid development, supported by advancements in computing technology, increasing availability of spatiotemporal data, and availability of historical data that allows for training data-driven LSTM models....
Evaluation of 2-D shear-wave velocity models and VS30at six strong-motion recording stations in southern California using multichannel analysis of surface waves and refraction tomography
Joanne H. Chan, Rufus D. Catchings, Mark R. Goldman, Coyn J. Criley, Robert R. Sickler
2024, Open-File Report 2024-1016
To better understand the potential for amplified ground shaking at sites that house critical infrastructure, the U.S. Geological Survey (USGS) evaluated shear-wave velocities (VS) at six strong-motion recording stations in Southern California Edison facilities in southern California. We calculated VS30 (time-averaged shear-wave velocity in the upper 30 meters [m]), which...
Network connectivity contributes to native small-bodied fish assemblages in the upper Mississippi River system
Shaley A Valentine, Kristen L. Bouska, Gregory W. Whitledge
2024, Journal of Freshwater Biology
Effective management and conservation of fishes requires understanding habitat use across multiple life stages while ensuring necessary habitats are both available and accessible. Tributary habitats may play an important role in recruitment and dispersal of fishes in anthropogenically modified rivers such as the...
Developing transmissible vaccines for animal infections
Daniel G. Streicker, Megan E. Griffiths, Rustom Antia, Laura M. Bergner, Peter Bowman, Maria Vitoria dos Santos de Moraes, Kevin Esvelt, Mike Famulare, Amy T. Gilbert, Biao He, Michael A. Jarvis, David A. Kennedy, Jennifer Kuzma, Carolyne Nasimiyu Wanyonyi, Christopher Remien, Kyle Rosenke, Tonie E. Rocke, Courtney Schreiner, Justin Sheen, David Simons, Ivet A. Yordanova, James J. Bull, Scott L. Nuismer
2024, Science (384) 275-277
Many emerging and reemerging pathogens originate from wildlife, but nearly all wild species are unreachable using conventional vaccination, which requires capture of and vaccine administration to individual animals. By enabling immunization at scales sufficient to interrupt pathogen transmission, transmissible vaccines (TVs) that spread themselves through wildlife populations...
Acute toxicity of the lampricide 4-nitro-3-(trifluoromethyl)phenol to the Mussel (Obovaria subrotunda), its host (Percina maculata), and a surrogate mussel species (Obovaria olivaria)
Teresa J. Newton, Nicholas A. Schloesser, Cheryl A. Kaye, Chad K. Andresen, Michael A. Boogaard, Christina M. Carter, Ryan Jay Ellingson, Courtney A Kirkeeng, Justin Schueller
2024, Environmental Toxicology & Chemistry
The risk of lampricide applications (such as 4-nitro-3-[trifluoromethyl]phenol [TFM]) to nontarget fauna continues to be a concern within the Great Lakes Fishery Commission Sea Lamprey Control Program, especially among imperiled aquatic species—such as native freshwater mussels. The Grand River (Ohio, USA) is routinely treated...
Nutrient chemistry in the Elizabeth Lake subwatershed—Effects of onsite wastewater treatment systems on groundwater and lake water quality, Los Angeles County, California
Adelia M McGregor, Joseph L. Domagalski, Krishangi D. Groover, Angela M. Hansen, Anthony A. Brown
2024, Scientific Investigations Report 2024-5012
Nutrient (nitrogen [N] and phosphorus [P] chemistry) downgradient from onsite wastewater treatment system (OWTS) was evaluated with a groundwater study in the area surrounding Elizabeth Lake, the largest of three sag lakes within the Santa Clara River watershed of Los Angeles County, California.Elizabeth Lake is listed on the “303 (d)...