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Testing hypotheses on distribution shifts and changes in phenology of imperfectly detectable species

Methods in Ecology and Evolution
By: , , , , , , , , and 
https://doi.org/10.1111/2041-210X.12362

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Abstract

  1. With ongoing climate change, many species are expected to shift their spatial and temporal distributions. To document changes in species distribution and phenology, detection/non-detection data have proven very useful. Occupancy models provide a robust way to analyse such data, but inference is usually focused on species spatial distribution, not phenology.
  2. We present a multi-season extension of the staggered-entry occupancy model of Kendall et al. (2013, Ecology, 94, 610), which permits inference about the within-season patterns of species arrival and departure at sampling sites. The new model presented here allows investigation of species phenology and spatial distribution across years, as well as site extinction/colonization dynamics.
  3. We illustrate the model with two data sets on European migratory passerines and one data set on North American treefrogs. We show how to derive several additional phenological parameters, such as annual mean arrival and departure dates, from estimated arrival and departure probabilities.
  4. Given the extent of detection/non-detection data that are available, we believe that this modelling approach will prove very useful to further understand and predict species responses to climate change.
Publication type Article
Publication Subtype Journal Article
Title Testing hypotheses on distribution shifts and changes in phenology of imperfectly detectable species
Series title Methods in Ecology and Evolution
DOI 10.1111/2041-210X.12362
Volume 6
Issue 6
Year Published 2015
Language English
Publisher Wiley
Contributing office(s) Coop Res Unit Seattle
Description 10 p.
First page 638
Last page 647
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